split the file into a set of files

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Hi all
I have DNA sequencing file and i need to split the file into multiple files as follows:
if the input file contain:
ACGTTTTGGGGGGGGTCCCCCTAC
ACGGACTTTTACGTTTTTTTTTTT
GGGTTTTTAAACCCGGGTTTGGTT
GGTTTTTCCCCCAAAAAATTTTTC
CCCCTAAAAAAAACGGGGGTTTGG

the output will be depend on the number of data nodes: if the this number 4 :
we should have 4 files:
f1
ACGTTT
ACGGACTTTTACGTTTTTTTTTTT
GGGTTTTTAAACCCGGGTTTGGTT
GGTTTTTCCCCCAAAAAATTTTTC
CCCCTAAAAAAAACGGGGGTTTGG
f2
TGGGGGGGGTCC
ACGGACTTTTACGTTTTTTTTTTT
GGGTTTTTAAACCCGGGTTTGGTT
GGTTTTTCCCCCAAAAAATTTTTC
CCCCTAAAAAAAACGGGGGTTTGG
f3
GGGTCC
ACGGACTTTTACGTTTTTTTTTTT
GGGTTTTTAAACCCGGGTTTGGTT
GGTTTTTCCCCCAAAAAATTTTTC
CCCCTAAAAAAAACGGGGGTTTGG
f4
CCCTAC
ACGGACTTTTACGTTTTTTTTTTT
GGGTTTTTAAACCCGGGTTTGGTT
GGTTTTTCCCCCAAAAAATTTTTC
CCCCTAAAAAAAACGGGGGTTTGG

i.e each file contain substring from the first seq and all the reminder sequences
and then we execute specific binary file for each file

Posted 16-Dec-13 2:43am

mostafa_bioinfo

Updated 16-Dec-13 4:27am

Sergey Alexandrovich Kryukov

v2

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Richard MacCutchan 16-Dec-13 9:44am

Sounds like a good idea. Don't forget to tell us when it's finished.

However if you are hoping for some assistance then please include a proper question.

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